Frank Publications

Robust and replicable measurement for prepulse inhibition of the acoustic startle response.

Molecular psychiatry

Miller EA, Kastner DB, Grzybowski MN, Dwinell MR, Geurts AM, Frank LM

Constant Sub-second Cycling between Representations of Possible Futures in the Hippocampus.

Cell

Kay K, Chung JE, Sosa M, Schor JS, Karlsson MP, Larkin MC, Liu DF, Frank LM

Dorsal and Ventral Hippocampal Sharp-Wave Ripples Activate Distinct Nucleus Accumbens Networks.

Neuron

Sosa M, Joo HR, Frank LM

Early Hippocampal Sharp-Wave Ripple Deficits Predict Later Learning and Memory Impairments in an Alzheimer's Disease Mouse Model.

Cell reports

Jones EA, Gillespie AK, Yoon SY, Frank LM, Huang Y

A microfabricated, 3D-sharpened silicon shuttle for insertion of flexible electrode arrays through dura mater into brain.

Journal of neural engineering

Joo HR, Fan JL, Chen S, Pebbles JA, Liang H, Chung JE, Yorita AM, Tooker A, Tolosa V, Geaghan-Breiner C, Roumis D, Liu D, Haque R, Frank L

BRAIN Initiative: Cutting-Edge Tools and Resources for the Community.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Litvina E, Adams A, Barth A, Bruchez M, Carson J, Chung JE, Dupre KB, Frank LM, Gates KM, Harris KM, Joo H, William Lichtman J, Ramos KM, Sejnowski T, Trimmer JS, White S, Koroshetz W

Chronic Implantation of Multiple Flexible Polymer Electrode Arrays.

Journal of visualized experiments : JoVE

Chung JE, Joo HR, Smyth CN, Fan JL, Geaghan-Breiner C, Liang H, Liu DF, Roumis D, Chen S, Lee KY, Pebbles JA, Tooker AC, Tolosa VM, Frank LM

Three brain states in the hippocampus and cortex.

Hippocampus

Kay K, Frank LM

The hippocampal sharp wave-ripple in memory retrieval for immediate use and consolidation.

Nature reviews. Neuroscience

Joo HR, Frank LM

High-Density, Long-Lasting, and Multi-region Electrophysiological Recordings Using Polymer Electrode Arrays.

Neuron

Chung JE, Joo HR, Fan JL, Liu DF, Barnett AH, Chen S, Geaghan-Breiner C, Karlsson MP, Karlsson M, Lee KY, Liang H, Magland JF, Pebbles JA, Tooker AC, Greengard LF, Tolosa VM, Frank LM

The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders.

Cell

Willsey AJ, Morris MT, Wang S, Willsey HR, Sun N, Teerikorpi N, Baum TB, Cagney G, Bender KJ, Desai TA, Srivastava D, Davis GW, Doudna J, Chang E, Sohal V, Lowenstein DH, Li H, Agard D, Keiser MJ, Shoichet B, von Zastrow M, Mucke L, Finkbeiner S, Gan L, Sestan N, Ward ME, Huttenhain R, Nowakowski TJ, Bellen HJ, Frank LM, Khokha MK, Lifton RP, Kampmann M, Ideker T, State MW, Krogan NJ

Are We There Yet? Identification of Reward-Selective Cells in the Hippocampus.

Neuron

Sosa M, Frank LM

A Comparison Study of Point-Process Filter and Deep Learning Performance in Estimating Rat Position Using an Ensemble of Place Cells.

Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference

Rezaei MR, Gillespie AK, Guidera JA, Nazari B, Sadri S, Frank LM, Eden UT, Yousefi A

Specific hippocampal representations are linked to generalized cortical representations in memory.

Nature communications

Yu JY, Liu DF, Loback A, Grossrubatscher I, Frank LM

International Neuroscience Initiatives through the Lens of High-Performance Computing.

Computer

Kristofer E. Bouchard, James B. Aimone, Miyoung Chun, Thomas Dean, Michael Denker, Markus Diesmann, David D. Donofrio, Loren M. Frank, Narayanan Kasthuri, Christof Koch, Oliver Rubel, Horst D. Simon, F.T. Sommer, Prabhat

Characterizing Complex, Multi-Scale Neural Phenomena Using State-Space Models.

Dynamic Neuroscience

Uri T. Eden, Loren M. Frank, Long Tao

Neural Activity Patterns Underlying Spatial Coding in the Hippocampus.

Current topics in behavioral neurosciences

Sosa M, Gillespie AK, Frank LM

Hippocampal-Prefrontal Reactivation during Learning Is Stronger in Awake Compared with Sleep States.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Tang W, Shin JD, Frank LM, Jadhav SP

A Fully Automated Approach to Spike Sorting.

Neuron

Chung JE, Magland JF, Barnett AH, Tolosa VM, Tooker AC, Lee KY, Shah KG, Felix SH, Frank LM, Greengard LF

Distinct hippocampal-cortical memory representations for experiences associated with movement versus immobility.

eLife

Yu JY, Kay K, Liu DF, Grossrubatscher I, Loback A, Sosa M, Chung JE, Karlsson MP, Larkin MC, Frank LM

A cortical-hippocampal-cortical loop of information processing during memory consolidation.

Nature neuroscience

Rothschild G, Eban E, Frank LM

Interplay between Hippocampal Sharp-Wave-Ripple Events and Vicarious Trial and Error Behaviors in Decision Making.

Neuron

Papale AE, Zielinski MC, Frank LM, Jadhav SP, Redish AD

High-Performance Computing in Neuroscience for Data-Driven Discovery, Integration, and Dissemination.

Neuron

Bouchard KE, Aimone JB, Chun M, Dean T, Denker M, Diesmann M, Donofrio DD, Frank LM, Kasthuri N, Koch C, Ruebel O, Simon HD, Sommer FT

Cover Image, Volume 26, Issue 10.

Hippocampus

Howard Eichenbaum, David G. Amaral, Elizabeth A. Buffalo, György Buzsáki, Neal Cohen, Lila Davachi, Loren Frank, Stephan Heckers, Richard G. M. Morris, Edvard I. Moser, Lynn Nadel, John O'Keefe, Alison Preston, Charan Ranganath, Alcino Silva, Menno Witter

Rapid classification of hippocampal replay content for real-time applications.

Journal of neurophysiology

Deng X, Liu DF, Karlsson MP, Frank LM, Eden UT

Hippocampus at 25.

Hippocampus

Eichenbaum H, Amaral DG, Buffalo EA, Buzsáki G, Cohen N, Davachi L, Frank L, Heckers S, Morris RG, Moser EI, Nadel L, O'Keefe J, Preston A, Ranganath C, Silva A, Witter M

Apolipoprotein E4 Causes Age-Dependent Disruption of Slow Gamma Oscillations during Hippocampal Sharp-Wave Ripples.

Neuron

Gillespie AK, Jones EA, Lin YH, Karlsson MP, Kay K, Yoon SY, Tong LM, Nova P, Carr JS, Frank LM, Huang Y

Coordinated Excitation and Inhibition of Prefrontal Ensembles during Awake Hippocampal Sharp-Wave Ripple Events.

Neuron

Jadhav SP, Rothschild G, Roumis DK, Frank LM

A hippocampal network for spatial coding during immobility and sleep.

Nature

Kay K, Sosa M, Chung JE, Karlsson MP, Larkin MC, Frank LM

Decoding position from multiunit activity using a marked point process filter.

BMC Neuroscience

Xinyi Deng, Daniel F Liu, Kenneth Kay, Loren M Frank, Uri T Eden

Hippocampal sharp-wave ripples in waking and sleeping states.

Current opinion in neurobiology

Roumis DK, Frank LM

Clusterless Decoding of Position from Multiunit Activity Using a Marked Point Process Filter.

Neural computation

Deng X, Liu DF, Kay K, Frank LM, Eden UT

Dynamic Hippocampal Circuits Support Learning- and Memory-Guided Behaviors.

Cold Spring Harbor symposia on quantitative biology

Anderson EB, Grossrubatscher I, Frank L

Reconceiving the hippocampal map as a topological template.

eLife

Dabaghian Y, Brandt VL, Frank LM

Hippocampal output area CA1 broadcasts a generalized novelty signal during an object-place recognition task.

Hippocampus

Larkin MC, Lykken C, Tye LD, Wickelgren JG, Frank LM

Hippocampal-cortical interaction in decision making.

Neurobiology of learning and memory

Yu JY, Frank LM

Memory Replay in the Hippocampus.

Space,Time and Memory in the Hippocampal Formation

Shantanu P. Jadhav, Loren M. Frank

Towards a large-scale recording system: demonstration of polymer-based penetrating array for chronic neural recording.

Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference

Tooker A, Liu D, Anderson EB, Felix S, Shah KG, Lee KY, Chung JE, Pannu S, Frank L, Tolosa V

Insertion of flexible neural probes using rigid stiffeners attached with biodissolvable adhesive.

Journal of visualized experiments : JoVE

Felix SH, Shah KG, Tolosa VM, Sheth HJ, Tooker AC, Delima TL, Jadhav SP, Frank LM, Pannu SS

Rapid and continuous modulation of hippocampal network state during exploration of new places.

PloS one

Kemere C, Carr MF, Karlsson MP, Frank LM

Hippocampal SWR activity predicts correct decisions during the initial learning of an alternation task.

Neuron

Singer AC, Carr MF, Karlsson MP, Frank LM

A prefrontal cortex-brainstem neuronal projection that controls response to behavioural challenge.

Nature

Warden MR, Selimbeyoglu A, Mirzabekov JJ, Lo M, Thompson KR, Kim SY, Adhikari A, Tye KM, Frank LM, Deisseroth K

Transient slow gamma synchrony underlies hippocampal memory replay.

Neuron

Carr MF, Karlsson MP, Frank LM

Spatial information outflow from the hippocampal circuit: distributed spatial coding and phase precession in the subiculum.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Kim SM, Ganguli S, Frank LM

Awake hippocampal sharp-wave ripples support spatial memory.

Science (New York, N.Y.)

Jadhav SP, Kemere C, German PW, Frank LM

A single microcircuit with multiple functions: state dependent information processing in the hippocampus.

Current opinion in neurobiology

Carr MF, Frank LM

Optetrode: a multichannel readout for optogenetic control in freely moving mice.

Nature neuroscience

Anikeeva P, Andalman AS, Witten I, Warden M, Goshen I, Grosenick L, Gunaydin LA, Frank LM, Deisseroth K

The structure of networks that produce the transformation from grid cells to place cells.

Neuroscience

Cheng S, Frank LM

Acquisition of neural learning in cerebellum and cerebral cortex for smooth pursuit eye movements.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Li JX, Medina JF, Frank LM, Lisberger SG

Hippocampal replay in the awake state: a potential substrate for memory consolidation and retrieval.

Nature neuroscience

Carr MF, Jadhav SP, Frank LM

Probability of repeating patterns in simultaneous neural data.

Neural computation

Smith AC, Nguyen VK, Karlsson MP, Frank LM, Smith P

Experience-dependent development of coordinated hippocampal spatial activity representing the similarity of related locations.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Singer AC, Karlsson MP, Nathe AR, Carr MF, Frank LM

Rewarded outcomes enhance reactivation of experience in the hippocampus.

Neuron

Singer AC, Frank LM

Reactivating memories for consolidation.

Neuron

Jadhav SP, Frank LM

Awake replay of remote experiences in the hippocampus.

Nature neuroscience

Karlsson MP, Frank LM

Hippocampal lesions impair rapid learning of a continuous spatial alternation task.

PloS one

Kim SM, Frank LM

Network dynamics underlying the formation of sparse, informative representations in the hippocampus.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Karlsson MP, Frank LM

New experiences enhance coordinated neural activity in the hippocampus.

Neuron

Cheng S, Frank LM

Hippocampal and cortical place cell plasticity: implications for episodic memory.

Hippocampus

Frank LM, Brown EN, Stanley GB

Functional magnetic resonance imaging activity during the gradual acquisition and expression of paired-associate memory.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Law JR, Flanery MA, Wirth S, Yanike M, Smith AC, Frank LM, Suzuki WA, Brown EN, Stark CE

An analysis of hippocampal spatio-temporal representations using a Bayesian algorithm for neural spike train decoding.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society

Barbieri R, Wilson MA, Frank LM, Brown EN

Hippocampal plasticity across multiple days of exposure to novel environments.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Frank LM, Stanley GB, Brown EN

Dynamic analysis of neural encoding by point process adaptive filtering.

Neural computation

Eden UT, Frank LM, Barbieri R, Solo V, Brown EN

Dynamic analyses of information encoding in neural ensembles.

Neural computation

Barbieri R, Frank LM, Nguyen DP, Quirk MC, Solo V, Wilson MA, Brown EN

Dynamic analysis of learning in behavioral experiments.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Smith AC, Frank LM, Wirth S, Yanike M, Hu D, Kubota Y, Graybiel AM, Suzuki WA, Brown EN

A Bayesian decoding algorithm for analysis of information encoding in neural ensembles.

Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference

Barbieri R, Frank LM, Nguyen DP, Quirk MC, Solo V, Wilson MA, Brown EN

Making space for rats: from synapse to place code.

Neuron

Nathe AR, Frank LM

Persistent activity and memory in the entorhinal cortex.

Trends in neurosciences

Frank LM, Brown EN

Single neurons in the monkey hippocampus and learning of new associations.

Science (New York, N.Y.)

Wirth S, Yanike M, Frank LM, Smith AC, Brown EN, Suzuki WA

An application of reversible-jump Markov chain Monte Carlo to spike classification of multi-unit extracellular recordings.

Network (Bristol, England)