Christoph Kirst, PhD, MS, BS

Computational systems neuroscience

M_Anatomy-General

Publications

Extracellular matrix proteolysis maintains synapse plasticity during brain development.

Nature neuroscience

Nakajo H, Cao R, Mula SA, McKetney J, Silva NJ, Li KH, Chalkley RJ, Randolph LK, Shah M, Rose IVL, Kampmann M, Swaney DL, Kirst C, Molofsky AV

Design of Hopfield Networks Based on Superconducting Coupled Oscillators.

medRxiv : the preprint server for health sciences

Ran Cheng, Christoph Kirst, Dilip Vasudevan

Extracellular matrix proteolysis maintains synapse plasticity during brain development.

Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Nakajo H, Cao R, Mula SA, McKetney J, Silva NJ, Shah M, Rose IVL, Kampmann M, Swaney DL, Kirst C, Molofsky AV

Publisher Correction: Network-level encoding of local neurotransmitters in cortical astrocytes.

Nature

Cahill MK, Collard M, Tse V, Reitman ME, Etchenique R, Kirst C, Poskanzer KE

Network-level encoding of local neurotransmitters in cortical astrocytes.

Nature

Cahill MK, Collard M, Tse V, Reitman ME, Etchenique R, Kirst C, Poskanzer KE

Super-Tsetlin: Superconducting Tsetlin Machines.

IEEE Transactions on Applied Superconductivity

Ran Cheng, Dilip Vasudevan, Christoph Kirst

Regional specialization manifests in the reliability of neural population codes.

bioRxiv : the preprint server for biology

Guidera JA, Gramling DP, Comrie AE, Joshi A, Denovellis EL, Lee KH, Zhou J, Thompson P, Hernandez J, Yorita A, Haque R, Kirst C, Frank LM

Network-level encoding of local neurotransmitters in cortical astrocytes.

bioRxiv : the preprint server for biology

Cahill MK, Collard M, Tse V, Reitman ME, Etchenique R, Kirst C, Poskanzer KE

Resolving Non-identifiability Mitigates Bias in Models of Neural Tuning and Functional Coupling.

bioRxiv : the preprint server for biology

Sachdeva P, Bak JH, Livezey J, Kirst C, Frank L, Bhattacharyya S, Bouchard KE

Superconducting-Oscillatory Neural Network With Pixel Error Detection for Image Recognition.

IEEE Transactions on Applied Superconductivity

Ran Cheng, Christoph Kirst, Dilip Vasudevan

Edinger-Westphal peptidergic neurons enable maternal preparatory nesting.

Neuron

Topilko T, Diaz SL, Pacheco CM, Verny F, Rousseau CV, Kirst C, Deleuze C, Gaspar P, Renier N

Mapping the Fine-Scale Organization and Plasticity of the Brain Vasculature.

Cell

Kirst C, Skriabine S, Vieites-Prado A, Topilko T, Bertin P, Gerschenfeld G, Verny F, Topilko P, Michalski N, Tessier-Lavigne M, Renier N

WNT signaling memory is required for ACTIVIN to function as a morphogen in human gastruloids.

eLife

Yoney A, Etoc F, Ruzo A, Carroll T, Metzger JJ, Martyn I, Li S, Kirst C, Siggia ED, Brivanlou AH

hPSC Modeling Reveals that Fate Selection of Cortical Deep Projection Neurons Occurs in the Subplate.

Cell stem cell

Ozair MZ, Kirst C, van den Berg BL, Ruzo A, Rito T, Brivanlou AH

Neuromodulatory Control of Long-Term Behavioral Patterns and Individuality across Development.

Cell

Stern S, Kirst C, Bargmann CI

Transition to reconstructibility in weakly coupled networks.

PloS one

Lünsmann BJ, Kirst C, Timme M

Shifting attention to dynamics: Self-reconfiguration of neural networks.

Current Opinion in Systems Biology

Christoph Kirst, Carl D. Modes, Marcelo O. Magnasco

Convergence of Self-Organizing Pulse-Coupled Oscillator Synchronization in Dynamic Networks.

IEEE Transactions on Automatic Control

Johannes Klinglmayr, Christian Bettstetter, Marc Timme, Christoph Kirst

A Balance between Secreted Inhibitors and Edge Sensing Controls Gastruloid Self-Organization.

Developmental cell

Etoc F, Metzger J, Ruzo A, Kirst C, Yoney A, Ozair MZ, Brivanlou AH, Siggia ED

Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes.

Cell

Renier N, Adams EL, Kirst C, Wu Z, Azevedo R, Kohl J, Autry AE, Kadiri L, Umadevi Venkataraju K, Zhou Y, Wang VX, Tang CY, Olsen O, Dulac C, Osten P, Tessier-Lavigne M

Dynamic information routing in complex networks.

Nature communications

Kirst C, Timme M, Battaglia D

Guaranteeing global synchronization in networks with stochastic interactions.

New Journal of Physics

Johannes Klinglmayr, Christoph Kirst, Christian Bettstetter, Marc Timme

Local control of non-local information flow in oscillatory neuronal networks.

BMC Neuroscience

Christoph Kirst, Marc Timme, Demian Battaglia

Breakdown of order preservation in symmetric oscillator networks with pulse-coupling.

Chaos (Woodbury, N.Y.)

Kielblock H, Kirst C, Timme M

Partial Reset in Pulse-Coupled Oscillators.

SIAM Journal on Applied Mathematics

Christoph Kirst, Marc Timme

Partial response to supra-threshold excitation desynchronizes spiking neurons.

BMC Neuroscience

Christoph Kirst, Marc Timme

How Precise is the Timing of Action Potentials?

Frontiers in neuroscience

Kirst C, Timme M

Sequential desynchronization in networks of spiking neurons with partial reset.

Physical review letters

Kirst C, Geisel T, Timme M

From networks of unstable attractors to heteroclinic switching.

Physical review. E, Statistical, nonlinear, and soft matter physics

Kirst C, Timme M